NEWS

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BayesSUR 2.3-3

• Use raw pointer to pass hyperparamters instead of using pugixml

BayesSUR 2.3-2 (2026-05-15)

• Save tick in BayesSUR() returned object and use it in plotMCMCdiag()
• Fix CRAN warnings about deprecated void omp_set_nested(int) and pugixml uninitialization

BayesSUR 2.3-1 (2025-11-16)

• Add color options in plotNetwork() corresponding to positive and negative regression coefficients
• If standardize = TRUE in main function BayesSUR(), the columns of X_0 without variation will not be scaled.
• Fix bug about index names in plotEstimator()

BayesSUR 2.3-0 (2025-03-27)

• Make arma::inv as an alternative to arma::inv_sympd in the case of a matrix is singular or not positive definite
• Fixed a bug about HRR model introduced in v2.2-0 by bringing back the control of a_omega and b_omega in function BayesSUR()
• Fixed a bug in function SUR_Chain::stepWGibbs() for extracting a submatrix
• Simplified the calculation in function SUR_Chain::logPGamma

BayesSUR 2.2-1 (2024-06-30)

• Fixed a bug about SUR_Chain.cpp introduced in version 2.2-0
• Fixed argument mrfG index issue in function BayesSUR()

BayesSUR 2.2-0 (2024-06-13)

• Fixed a bug about the use of temperature parameter in HRR_Chain.cpp, also minor update in SUR_Chain.cpp
• Fixed random effects' sampler HRR_Chain::stepW0()
• Added argument beta.type in function plotEstimator() to plot MPM coefficient estimates
• Fixed argument mrfG index issue in function BayesSUR()

BayesSUR 2.1-7 (2024-04-17)

• Increased the threshold of predictor dimension to 100000 (previously 5000) when pre-computing XtX
• Minor changes of the parameter updates of the HRR models, especially in function step()

BayesSUR 2.1-6 (2024-01-09)

• Fixed issues of knitr VignetteBuilder and README

BayesSUR 2.1-5 (2023-11-30)

• Updated citation, added README and one more vignette

BayesSUR 2.1-4 (2023-08-28)

• Fixed a documentation issue by adding @alias BayesSUR-package

BayesSUR 2.1-3 (2023-01-28)

• Updated C++11 specification to current default of C++17
• Cleaned R scripts

BayesSUR 2.1-2 (2022-08-08)

• Fixed gcc-UBSAN error reference binding to null pointer in SUR_Chain.cpp:3818

BayesSUR 2.1-1 (2022-08-06)

• Fixed R session aborted fatal error

BayesSUR 2.1-0 (2022-06-30)

• Fixed an issue with omp_set_num_threads that did not work

BayesSUR 2.0-1 (2021-11-30)

• Code update

BayesSUR 2.0-0 (2021-05-05)

• Major update, introducing random effects for mandatory variables without variable selection.